SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    137, 88, 126, 31, 51358, 115, 80, 37, 11, 
    140, 41, 30, 90, 38, 124, 81
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00081

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "14.36"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 23,
        "rows_produced_per_join": 4,
        "filtered": "19.96",
        "index_condition": "(`test_uchur_k`.`cscart_product_prices`.`product_id` in (137,88,126,31,51358,115,80,37,11,140,41,30,90,38,124,81))",
        "cost_info": {
          "read_cost": "13.90",
          "eval_cost": "0.46",
          "prefix_cost": "14.36",
          "data_read_per_join": "110"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`test_uchur_k`.`cscart_product_prices`.`lower_limit` = 1) and (`test_uchur_k`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
11 8400.00000000
30 93800.00000000
31 93800.00000000
37 95200.00000000
38 95200.00000000
41 109900.00000000
80 121100.00000000
81 14000.00000000
88 28700.00000000
90 146300.00000000
115 15400.00000000
124 27300.00000000
126 11200.00000000
137 25200.00000000
140 28000.00000000
51358 56000.00000000